From correlation to mechanism: how in silico microbiome modelling is reshaping supplement formulation

Published: 23-Apr-2026

A new approach is enabling formulators to design food-grade ingredients for specific metabolic targets — and a peer-reviewed clinical study in dry eye disease provides early proof of concept

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For much of the history of nutraceuticals, ingredient selection has been guided by association: epidemiological observations, animal studies and small human trials showing that a given fibre or botanical correlates with a health outcome.

The mechanism, what the gut microbiome does with an ingredient, has largely remained a black box.

A London-based biotechnology company, Enbiosis Biotechnologies, is working to change that logic.

Their platform uses genome-scale metabolic models of gut bacteria and an AI retrosynthesis engine to predict which food-grade precursors will produce targeted health-promoting metabolites in a patient population's microbiome before clinical studies begin. 

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